Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail constituent protein | SAMN05216248_101715 | Not Available | Positive | 728323 - 728982 | 23263.5 |
| Hypothetical protein | SAMN05216248_101716 | Not Available | Positive | 728992 - 729372 | 13918.5 |
| Hypothetical protein | SAMN05216248_101717 | Not Available | Positive | 729390 - 729695 | 11076.1 |
| Putative tail component protein | SAMN05216248_101718 | Not Available | Positive | 729723 - 732779 | 107001.0 |
| Minor tail protein m | SAMN05216248_101719 | Not Available | Positive | 732779 - 733117 | 12669.1 |
| Minor tail protein l | SAMN05216248_101720 | Not Available | Positive | 733129 - 733881 | 27356.7 |
| Minor tail protein | SAMN05216248_101721 | Not Available | Positive | 733884 - 734645 | 28743.0 |
| hypothetical protein | SAMN05216248_101722 | Not Available | Negative | 734855 - 735079 | 7606.1 |
| hypothetical protein | SAMN05216248_101723 | Not Available | Negative | 735182 - 735328 | 5381.82 |
| hypothetical protein | SAMN05216248_101724 | Not Available | Positive | 735518 - 735757 | 8840.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
