Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase kinase/phosphatase | SAMN05216248_101241 | Not Available | Positive | 253722 - 255437 | 65677.2 |
| atp-dependent helicase hrpa | SAMN05216248_101242 | Not Available | Positive | 255508 - 259419 | 147737.0 |
| beta-ketodecanoyl-[acyl-carrier-protein] synthase | SAMN05216248_101243 | Not Available | Positive | 259771 - 260892 | 40435.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216248_101244 | Not Available | Positive | 260910 - 261524 | 23102.5 |
| putative zinc-finger | SAMN05216248_101245 | Not Available | Positive | 261518 - 261763 | 9608.82 |
| putative porin | SAMN05216248_101247 | Not Available | Negative | 261871 - 263193 | 48432.4 |
| hypothetical protein | SAMN05216248_101248 | Not Available | Positive | 263477 - 264601 | 42783.6 |
| aquaporin z | SAMN05216248_101249 | Not Available | Negative | 264722 - 265423 | 23832.7 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05216248_101250 | Not Available | Negative | 265716 - 267548 | 67556.5 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN05216248_101251 | Not Available | Negative | 267628 - 268191 | 20199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
