Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101221 | Not Available | Negative | 229274 - 230065 | 28670.0 |
| threonine/homoserine efflux transporter rhta | SAMN05216248_101222 | Not Available | Positive | 230471 - 231331 | 30754.5 |
| uncharacterized nad(p)/fad-binding protein ydhs | SAMN05216248_101223 | Not Available | Negative | 231385 - 232773 | 50871.8 |
| glycosyl transferase family 2 | SAMN05216248_101224 | Not Available | Positive | 233523 - 234338 | 30578.8 |
| hypothetical protein | SAMN05216248_101225 | Not Available | Positive | 234524 - 236227 | 63370.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216248_101226 | Not Available | Positive | 236241 - 237938 | 62384.4 |
| hypothetical protein | SAMN05216248_101227 | Not Available | Positive | 237935 - 239203 | 47155.4 |
| hypothetical protein | SAMN05216248_101228 | Not Available | Positive | 239232 - 240683 | 52016.8 |
| lipopolysaccharide transport system permease protein | SAMN05216248_101229 | Not Available | Positive | 240949 - 241788 | 31418.9 |
| lipopolysaccharide transport system atp-binding protein | SAMN05216248_101230 | Not Available | Positive | 241778 - 243142 | 49016.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
