Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05216248_101211 | Not Available | Negative | 220020 - 220997 | 35574.4 |
| cytochrome c oxidase cbb3-type subunit 4 | SAMN05216248_101212 | Not Available | Negative | 220994 - 221167 | 6346.71 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05216248_101213 | Not Available | Negative | 221186 - 221794 | 22443.1 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05216248_101214 | Not Available | Negative | 221794 - 223236 | 53467.8 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05216248_101215 | Not Available | Negative | 223587 - 224534 | 33967.5 |
| cytochrome c oxidase cbb3-type subunit 4 | SAMN05216248_101216 | Not Available | Negative | 224531 - 224731 | 7294.62 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05216248_101217 | Not Available | Negative | 224735 - 225343 | 22678.4 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05216248_101218 | Not Available | Negative | 225354 - 226778 | 53000.4 |
| hypothetical protein | SAMN05216248_101219 | Not Available | Positive | 226858 - 227550 | 24597.6 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN05216248_101220 | Not Available | Negative | 227635 - 229200 | 56959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
