Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, crp/fnr family | SAMN05216248_101201 | Not Available | Negative | 210673 - 211407 | 27154.9 |
| flxa-like protein | SAMN05216248_101202 | Not Available | Positive | 211560 - 212027 | 15991.1 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05216248_101203 | Not Available | Negative | 212029 - 213411 | 52396.6 |
| hypothetical protein | SAMN05216248_101204 | Not Available | Negative | 213515 - 214198 | 24293.8 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05216248_101205 | Not Available | Negative | 214191 - 214403 | 7637.96 |
| cu2+-exporting atpase | SAMN05216248_101206 | Not Available | Negative | 214426 - 216876 | 87798.2 |
| hypothetical protein | SAMN05216248_101207 | Not Available | Negative | 216992 - 217531 | 20054.9 |
| cytochrome c oxidase accessory protein fixg | SAMN05216248_101208 | Not Available | Negative | 217548 - 218975 | 53896.4 |
| hypothetical protein | SAMN05216248_101209 | Not Available | Negative | 219183 - 219593 | 15031.3 |
| prevent-host-death family protein | SAMN05216248_101210 | Not Available | Negative | 219593 - 219847 | 9240.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
