Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101191 | Not Available | Positive | 201182 - 201772 | 21100.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101192 | Not Available | Negative | 201829 - 202692 | 31249.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216248_101193 | Not Available | Positive | 202795 - 203754 | 34357.1 |
| predicted lactoylglutathione lyase | SAMN05216248_101194 | Not Available | Negative | 203668 - 204039 | 13392.9 |
| dna polymerase-3 subunit gamma/tau | SAMN05216248_101195 | Not Available | Positive | 204119 - 206425 | 83445.9 |
| hypothetical protein | SAMN05216248_101196 | Not Available | Positive | 206469 - 206807 | 11908.7 |
| hypothetical protein | SAMN05216248_101197 | Not Available | Positive | 206942 - 207967 | 36635.6 |
| dna replication and repair protein recr | SAMN05216248_101198 | Not Available | Positive | 208026 - 208628 | 21485.1 |
| acyl-coa dehydrogenase | SAMN05216248_101199 | Not Available | Positive | 208761 - 209909 | 41393.1 |
| adenine phosphoribosyltransferase | SAMN05216248_101200 | Not Available | Negative | 210044 - 210592 | 20037.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
