Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05216248_101180 | Not Available | Negative | 183930 - 186329 | 87677.6 |
| xanthine dehydrogenase small subunit | SAMN05216248_101181 | Not Available | Negative | 186322 - 187770 | 52689.9 |
| dna-binding transcriptional regulator, gntr family | SAMN05216248_101182 | Not Available | Positive | 188051 - 188710 | 24681.0 |
| condensin subunit smc | SAMN05216248_101183 | Not Available | Positive | 188713 - 192201 | 131391.0 |
| cell division protein zipa | SAMN05216248_101184 | Not Available | Positive | 192461 - 193324 | 31848.8 |
| dna ligase (nad+) | SAMN05216248_101185 | Not Available | Positive | 193412 - 195769 | 85753.6 |
| hypothetical protein | SAMN05216248_101186 | Not Available | Positive | 195946 - 197109 | 43716.9 |
| hypothetical protein | SAMN05216248_101188 | Not Available | Positive | 197563 - 197994 | 15837.8 |
| hypothetical protein | SAMN05216248_101189 | Not Available | Positive | 198015 - 199976 | 73444.7 |
| protein of unknown function | SAMN05216248_101190 | Not Available | Positive | 200134 - 201180 | 38419.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
