Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | SAMN05216248_101169 | Not Available | Positive | 169741 - 170178 | 16219.4 |
| dihydroorotate oxidase a | SAMN05216248_101170 | Not Available | Positive | 170263 - 171282 | 35780.5 |
| 23s rrna m(2)g-2445 methyltransferase | SAMN05216248_101172 | Not Available | Positive | 172259 - 174523 | 84842.5 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05216248_101173 | Not Available | Positive | 174723 - 177122 | 89843.9 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05216248_101174 | Not Available | Negative | 177248 - 178708 | 52464.2 |
| hypothetical protein | SAMN05216248_101175 | Not Available | Positive | 178947 - 179291 | 12816.2 |
| benzoate membrane transport protein | SAMN05216248_101176 | Not Available | Negative | 179329 - 180519 | 41048.0 |
| transcriptional regulator, gntr family | SAMN05216248_101177 | Not Available | Positive | 180746 - 181510 | 28126.6 |
| guanine deaminase | SAMN05216248_101178 | Not Available | Negative | 181650 - 182954 | 47909.1 |
| xanthine dehydrogenase accessory factor | SAMN05216248_101179 | Not Available | Negative | 182967 - 183806 | 30436.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
