Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyltransferase and sulfurtransferase | SAMN05216248_101149 | Not Available | Negative | 147981 - 149843 | 67960.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216248_101150 | Not Available | Negative | 149870 - 150820 | 35190.5 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05216248_101151 | Not Available | Positive | 150924 - 152348 | 52561.4 |
| hypothetical protein | SAMN05216248_101152 | Not Available | Negative | 152463 - 153281 | 30859.6 |
| phosphoenolpyruvate synthase | SAMN05216248_101153 | Not Available | Positive | 153460 - 155835 | 86005.0 |
| predicted alpha/beta hydrolase | SAMN05216248_101154 | Not Available | Positive | 155942 - 156931 | 36143.1 |
| regulator of ribonuclease activity a | SAMN05216248_101155 | Not Available | Positive | 157120 - 157611 | 17491.0 |
| zinc transporter | SAMN05216248_101156 | Not Available | Positive | 157625 - 158620 | 37908.8 |
| hypothetical protein | SAMN05216248_101157 | Not Available | Positive | 158707 - 158952 | 8792.49 |
| conserved tm helix | SAMN05216248_101158 | Not Available | Positive | 158955 - 159779 | 28978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
