Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head morphogenesis protein | SAMN05216248_101705 | Not Available | Positive | 721924 - 722970 | 38219.9 |
| Virion structural protein | SAMN05216248_101706 | Not Available | Positive | 722979 - 723464 | 18843.4 |
| hypothetical protein | SAMN05216248_101707 | Not Available | Positive | 723518 - 724261 | 27928.6 |
| Hypothetical protein | SAMN05216248_101708 | Not Available | Positive | 724307 - 725086 | 27995.8 |
| Coat protein | SAMN05216248_101709 | Not Available | Positive | 725090 - 726067 | 34890.7 |
| heh/lem domain-containing protein | SAMN05216248_101710 | Not Available | Positive | 726124 - 726429 | 11123.2 |
| Putative head-tail joining protein | SAMN05216248_101711 | Not Available | Positive | 726440 - 726817 | 13011.7 |
| Putative head-tail joining protein | SAMN05216248_101712 | Not Available | Positive | 726820 - 727212 | 13673.1 |
| Hypothetical protein | SAMN05216248_101713 | Not Available | Positive | 727214 - 727858 | 23116.2 |
| Hypothetical protein | SAMN05216248_101714 | Not Available | Positive | 727855 - 728283 | 15364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
