Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05216248_101139 | Not Available | Negative | 135977 - 136513 | 19465.4 |
| transcriptional regulator, gntr family | SAMN05216248_101140 | Not Available | Positive | 136786 - 137496 | 26829.0 |
| methylisocitrate lyase | SAMN05216248_101141 | Not Available | Positive | 137496 - 138389 | 32160.6 |
| citrate synthase /2-methylcitrate synthase | SAMN05216248_101142 | Not Available | Positive | 138430 - 139557 | 41589.9 |
| aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) | SAMN05216248_101143 | Not Available | Positive | 139755 - 142349 | 94056.4 |
| 2-methylaconitate cis-trans isomerase | SAMN05216248_101144 | Not Available | Positive | 142359 - 143549 | 41256.4 |
| 2-methylcitrate dehydratase | SAMN05216248_101145 | Not Available | Positive | 143669 - 145153 | 54934.7 |
| misacylated trna(ala) deacylase | SAMN05216248_101146 | Not Available | Negative | 145290 - 146018 | 26721.1 |
| serine o-acetyltransferase | SAMN05216248_101147 | Not Available | Negative | 146021 - 147013 | 36081.7 |
| cysteine synthase a | SAMN05216248_101148 | Not Available | Negative | 147051 - 147968 | 33208.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
