Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101129 | Not Available | Positive | 125852 - 126781 | 33731.7 |
| allantoin racemase | SAMN05216248_101130 | Not Available | Negative | 126762 - 127478 | 25478.8 |
| nucleobase:cation symporter-1, ncs1 family | SAMN05216248_101131 | Not Available | Negative | 127492 - 129021 | 55367.4 |
| phosphoadenylylsulfate reductase (thioredoxin) | SAMN05216248_101132 | Not Available | Negative | 129495 - 130229 | 27914.1 |
| phosphoserine phosphatase | SAMN05216248_101133 | Not Available | Positive | 130382 - 130999 | 23506.5 |
| hth-type transcriptional regulator / antitoxin higa | SAMN05216248_101134 | Not Available | Negative | 131122 - 131478 | 13265.1 |
| mrna interferase higb | SAMN05216248_101135 | Not Available | Negative | 131478 - 131780 | 11357.8 |
| para-aminobenzoate synthetase component 1 | SAMN05216248_101136 | Not Available | Negative | 132010 - 133353 | 48979.3 |
| alpha-l-glutamate ligase-related protein | SAMN05216248_101137 | Not Available | Negative | 133453 - 134439 | 36110.8 |
| inactive transglutaminase fused to 7 transmembrane helices | SAMN05216248_101138 | Not Available | Negative | 134439 - 135971 | 56935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
