Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216248_101118 | Not Available | Negative | 118058 - 119131 | 41929.6 |
| hypothetical protein | SAMN05216248_101119 | Not Available | Negative | 119185 - 119316 | 4830.0 |
| hypothetical protein | SAMN05216248_101120 | Not Available | Negative | 119715 - 119984 | 9708.78 |
| hypothetical protein | SAMN05216248_101122 | Not Available | Negative | 120374 - 121006 | 22650.6 |
| protein of unknown function | SAMN05216248_101123 | Not Available | Negative | 121126 - 121704 | 21489.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101124 | Not Available | Negative | 121759 - 122643 | 32421.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216248_101125 | Not Available | Positive | 122737 - 123705 | 35235.7 |
| protein of unknown function | SAMN05216248_101126 | Not Available | Negative | 123665 - 124048 | 14084.7 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05216248_101127 | Not Available | Positive | 124156 - 124845 | 24972.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05216248_101128 | Not Available | Negative | 124979 - 125725 | 25320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
