Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN05216248_101108 | Not Available | Positive | 107756 - 108559 | 30136.5 |
| cytochrome c, mono-and diheme variants | SAMN05216248_101109 | Not Available | Negative | 108692 - 109585 | 32490.3 |
| hypothetical protein | SAMN05216248_101110 | Not Available | Negative | 109656 - 109751 | 3437.51 |
| acetyl-coa c-acetyltransferase | SAMN05216248_101111 | Not Available | Positive | 110142 - 111347 | 42121.9 |
| 3-hydroxyacyl-coa dehydrogenase / enoyl-coa hydratase / 3-hydroxybutyryl-coa epimerase | SAMN05216248_101112 | Not Available | Positive | 111364 - 113511 | 77008.0 |
| gmp synthase-glutamine amidotransferase | SAMN05216248_101113 | Not Available | Positive | 113595 - 114320 | 27149.4 |
| magnesium transporter | SAMN05216248_101114 | Not Available | Negative | 114317 - 115288 | 36739.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05216248_101115 | Not Available | Negative | 115427 - 116155 | 26893.5 |
| enoyl-coa hydratase | SAMN05216248_101116 | Not Available | Negative | 116368 - 117060 | 24437.8 |
| Trna-ser | Not Available | Not Available | Positive | 117397 - 117483 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
