Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompa | SAMN05216248_10199 | Not Available | Positive | 99907 - 100722 | 30069.5 |
| transcriptional regulator, gntr family | SAMN05216248_101100 | Not Available | Positive | 100993 - 102432 | 53442.8 |
| hypothetical protein | SAMN05216248_101101 | Not Available | Positive | 102537 - 103022 | 17408.3 |
| hypothetical protein | SAMN05216248_101102 | Not Available | Positive | 103185 - 103439 | 8979.88 |
| start domain-containing protein | SAMN05216248_101103 | Not Available | Positive | 103481 - 104086 | 22161.4 |
| hypothetical protein | SAMN05216248_101104 | Not Available | Positive | 104190 - 104426 | 8787.47 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 104496 - 104611 | 18.01 |
| regulator of ribonuclease activity b | SAMN05216248_101105 | Not Available | Positive | 104640 - 104981 | 12703.9 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05216248_101106 | Not Available | Positive | 105395 - 106804 | 52474.0 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN05216248_101107 | Not Available | Positive | 106809 - 107759 | 35743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
