Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose transport system atp-binding protein | SAMN05216248_10189 | Not Available | Positive | 89026 - 90525 | 54393.4 |
| l-arabinose abc transporter membrane protein | SAMN05216248_10190 | Not Available | Positive | 90543 - 91508 | 33860.8 |
| transcriptional regulator, iclr family | SAMN05216248_10191 | Not Available | Positive | 91689 - 92492 | 29405.6 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05216248_10192 | Not Available | Negative | 92493 - 93545 | 37367.2 |
| arac-type dna-binding protein | SAMN05216248_10193 | Not Available | Positive | 93728 - 94621 | 32543.6 |
| electron-transferring-flavoprotein dehydrogenase | SAMN05216248_10194 | Not Available | Negative | 94799 - 96463 | 60721.4 |
| electron transfer flavoprotein beta subunit | SAMN05216248_10195 | Not Available | Positive | 96971 - 97720 | 26358.2 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05216248_10196 | Not Available | Positive | 97723 - 98652 | 31447.6 |
| abc-type amino acid transport substrate-binding protein | SAMN05216248_10197 | Not Available | Positive | 98723 - 99538 | 29354.4 |
| protein of unknown function | SAMN05216248_10198 | Not Available | Positive | 99629 - 99910 | 10428.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
