Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMN05216248_10179 | Not Available | Positive | 80918 - 81556 | 23357.6 |
| adp-ribosylglycohydrolase | SAMN05216248_10180 | Not Available | Positive | 81553 - 82554 | 34196.2 |
| purine-cytosine permease | SAMN05216248_10181 | Not Available | Positive | 82745 - 84211 | 51242.0 |
| sugar or nucleoside kinase, ribokinase family | SAMN05216248_10182 | Not Available | Positive | 84204 - 85121 | 31627.9 |
| rho termination factor, n-terminal domain | SAMN05216248_10183 | Not Available | Negative | 85173 - 85553 | 13510.0 |
| hypothetical protein | SAMN05216248_10184 | Not Available | Negative | 85605 - 85871 | 9609.38 |
| hypothetical protein | SAMN05216248_10185 | Not Available | Negative | 85923 - 86255 | 10881.6 |
| ribosomal protein s18 acetylase rimi | SAMN05216248_10186 | Not Available | Positive | 86446 - 86925 | 17839.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216248_10187 | Not Available | Positive | 87195 - 88016 | 29995.1 |
| l-arabinose transport system substrate-binding protein | SAMN05216248_10188 | Not Available | Positive | 88049 - 89029 | 34751.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
