Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05216248_10168 | Not Available | Positive | 71644 - 72888 | 43254.2 |
| 4-amino-4-deoxychorismate lyase | SAMN05216248_10169 | Not Available | Positive | 72888 - 73703 | 29414.8 |
| upf0755 protein | SAMN05216248_10170 | Not Available | Positive | 73705 - 74850 | 42128.6 |
| dtmp kinase | SAMN05216248_10171 | Not Available | Positive | 74870 - 75502 | 22995.6 |
| dna polymerase-3 subunit delta' | SAMN05216248_10172 | Not Available | Positive | 75495 - 76484 | 36420.5 |
| tatd dnase family protein | SAMN05216248_10173 | Not Available | Positive | 76546 - 77331 | 28647.0 |
| transcriptional regulator, tetr family | SAMN05216248_10175 | Not Available | Positive | 77777 - 78430 | 25454.6 |
| cyclic pyranopterin phosphate synthase | SAMN05216248_10176 | Not Available | Positive | 78546 - 79514 | 34981.9 |
| protein of unknown function | SAMN05216248_10177 | Not Available | Positive | 79590 - 80195 | 22339.6 |
| hypothetical protein | SAMN05216248_10178 | Not Available | Positive | 80212 - 80772 | 20727.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
