Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase c | SAMN05216248_10158 | Not Available | Positive | 64082 - 65041 | 35700.7 |
| phosphoglycolate phosphatase | SAMN05216248_10159 | Not Available | Positive | 65028 - 65690 | 24217.8 |
| protease-4 | SAMN05216248_10160 | Not Available | Positive | 65712 - 66695 | 36005.0 |
| maf protein | SAMN05216248_10161 | Not Available | Negative | 66829 - 67407 | 20992.4 |
| uncharacterized protein | SAMN05216248_10162 | Not Available | Positive | 67513 - 68043 | 19606.3 |
| lsu ribosomal protein l32p | SAMN05216248_10163 | Not Available | Positive | 68057 - 68239 | 6756.95 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05216248_10164 | Not Available | Positive | 68274 - 69254 | 34227.9 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05216248_10165 | Not Available | Positive | 69381 - 70319 | 32409.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05216248_10166 | Not Available | Positive | 70344 - 71087 | 25645.9 |
| acyl carrier protein | SAMN05216248_10167 | Not Available | Positive | 71279 - 71515 | 8643.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
