Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase rstb | SAMN05216248_10147 | Not Available | Positive | 50658 - 52268 | 59733.6 |
| enterobactin synthetase component d | SAMN05216248_10148 | Not Available | Negative | 52265 - 52981 | 26250.7 |
| hypothetical protein | SAMN05216248_10149 | Not Available | Positive | 53128 - 53436 | 10843.0 |
| two component transcriptional regulator, winged helix family | SAMN05216248_10150 | Not Available | Positive | 53455 - 54132 | 25522.8 |
| two-component system, ompr family, sensor histidine kinase phoq | SAMN05216248_10151 | Not Available | Positive | 54129 - 55475 | 50593.0 |
| arac-type dna-binding protein | SAMN05216248_10152 | Not Available | Negative | 55612 - 56610 | 38042.5 |
| aerobic c4-dicarboxylate transport protein | SAMN05216248_10153 | Not Available | Positive | 56950 - 58281 | 46836.9 |
| xanthine dehydrogenase accessory factor | SAMN05216248_10154 | Not Available | Positive | 58422 - 59408 | 35797.1 |
| molybdenum cofactor cytidylyltransferase | SAMN05216248_10155 | Not Available | Positive | 59405 - 59995 | 20345.6 |
| ribonuclease e | SAMN05216248_10156 | Not Available | Negative | 60167 - 63322 | 115240.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
