Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101695 | Not Available | Positive | 716776 - 716874 | 3213.02 |
| Hypothetical protein | SAMN05216248_101696 | Not Available | Positive | 716879 - 717088 | 8037.69 |
| hypothetical protein | SAMN05216248_101697 | Not Available | Positive | 717085 - 717306 | 8129.51 |
| hypothetical protein | SAMN05216248_101698 | Not Available | Positive | 717303 - 717494 | 6602.09 |
| hypothetical protein | SAMN05216248_101699 | Not Available | Positive | 717491 - 717745 | 9086.02 |
| Hypothetical protein | SAMN05216248_101700 | Not Available | Negative | 717775 - 717975 | 6931.21 |
| Putative transposase | SAMN05216248_101701 | Not Available | Positive | 718049 - 718672 | 22901.0 |
| Hypothetical protein | SAMN05216248_101702 | Not Available | Positive | 718704 - 719180 | 17685.0 |
| Hypothetical protein | SAMN05216248_101703 | Not Available | Positive | 719155 - 720480 | 49834.3 |
| Portal protein | SAMN05216248_101704 | Not Available | Positive | 720480 - 721940 | 53141.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
