Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella basal body p-ring formation protein flga | SAMN05216248_10137 | Not Available | Negative | 39214 - 39978 | 27906.3 |
| chew protein | SAMN05216248_10138 | Not Available | Positive | 40071 - 41003 | 34331.7 |
| mcp methyltransferase, cher-type | SAMN05216248_10139 | Not Available | Positive | 41048 - 41875 | 30879.4 |
| flagellar basal-body rod protein flgb | SAMN05216248_10140 | Not Available | Positive | 42183 - 42590 | 14788.2 |
| flagellar basal-body rod protein flgc | SAMN05216248_10141 | Not Available | Positive | 42594 - 43037 | 15683.3 |
| flagellar basal-body rod modification protein flgd | SAMN05216248_10142 | Not Available | Positive | 43054 - 43779 | 24875.1 |
| flagellar hook protein flge | SAMN05216248_10143 | Not Available | Positive | 43811 - 45121 | 45406.5 |
| hypothetical protein | SAMN05216248_10144 | Not Available | Positive | 45304 - 46374 | 38485.9 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN05216248_10145 | Not Available | Negative | 46485 - 49382 | 107485.0 |
| two-component system, ompr family, response regulator rsta | SAMN05216248_10146 | Not Available | Positive | 49936 - 50661 | 27096.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
