Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 32161 - 32234 | Not Available |
| magnesium transporter | SAMN05216248_10128 | Not Available | Positive | 32578 - 34020 | 53303.8 |
| arc-like dna binding domain-containing protein | SAMN05216248_10129 | Not Available | Negative | 34123 - 34449 | 12368.8 |
| hypothetical protein | SAMN05216248_10130 | Not Available | Negative | 34836 - 35015 | 6418.01 |
| hypothetical protein | SAMN05216248_10131 | Not Available | Negative | 35026 - 35253 | 8133.73 |
| Trna-arg | Not Available | Not Available | Positive | 35579 - 35652 | Not Available |
| major facilitator superfamily protein | SAMN05216248_10133 | Not Available | Positive | 35938 - 37323 | 50065.4 |
| c-di-gmp-binding flagellar brake protein ycgr, contains pilznr and pilz domains | SAMN05216248_10134 | Not Available | Negative | 37384 - 38133 | 28463.8 |
| flagella synthesis protein flgn | SAMN05216248_10135 | Not Available | Negative | 38230 - 38700 | 17181.6 |
| anti-sigma-28 factor, flgm family | SAMN05216248_10136 | Not Available | Negative | 38749 - 39072 | 11510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
