Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_10116 | Not Available | Positive | 22268 - 22558 | 10617.4 |
| succinylglutamate desuccinylase | SAMN05216248_10117 | Not Available | Positive | 22570 - 23574 | 37314.0 |
| effector protein | SAMN05216248_10118 | Not Available | Negative | 23604 - 25148 | 54603.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05216248_10119 | Not Available | Negative | 25320 - 25826 | 18760.4 |
| l-threonine aldolase | SAMN05216248_10121 | Not Available | Positive | 26282 - 27286 | 35977.2 |
| alanyl-trna synthetase | SAMN05216248_10122 | Not Available | Positive | 27433 - 30051 | 93975.3 |
| aspartate kinase | SAMN05216248_10123 | Not Available | Positive | 30147 - 31388 | 44534.6 |
| carbon storage regulator, csra | SAMN05216248_10124 | Not Available | Positive | 31563 - 31751 | 6929.55 |
| Trna-ser | Not Available | Not Available | Positive | 31814 - 31901 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 32013 - 32086 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
