Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arginine abc transporter membrane protein /l-ornithine abc transporter membrane protein | SAMN05216248_1016 | Not Available | Positive | 5628 - 6326 | 26024.6 |
| hypothetical protein | SAMN05216248_1017 | Not Available | Positive | 6328 - 7440 | 40631.7 |
| l-arginine abc transporter atp-binding protein /l-ornithine abc transporter atp-binding protein | SAMN05216248_1018 | Not Available | Positive | 7468 - 8232 | 28140.2 |
| transcriptional regulator, arac family | SAMN05216248_1019 | Not Available | Positive | 8478 - 9458 | 36289.6 |
| hypothetical protein | SAMN05216248_10110 | Not Available | Negative | 9473 - 15328 | 217769.0 |
| acetylornithine aminotransferase apoenzyme /succinylornithine aminotransferase apoenzyme | SAMN05216248_10111 | Not Available | Positive | 15701 - 16921 | 43422.0 |
| arginine succinyltransferase | SAMN05216248_10112 | Not Available | Positive | 17167 - 18186 | 37127.1 |
| arginine succinyltransferase | SAMN05216248_10113 | Not Available | Positive | 18238 - 19263 | 37438.9 |
| succinylglutamic semialdehyde dehydrogenase | SAMN05216248_10114 | Not Available | Positive | 19263 - 20729 | 51553.3 |
| succinylarginine dihydrolase | SAMN05216248_10115 | Not Available | Positive | 20882 - 22228 | 48855.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
