Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | SAMN05216248_11398 | Not Available | Negative | 5926559 - 5927404 | 30067.2 |
| Tail length tape measure protein | SAMN05216248_11399 | Not Available | Negative | 5927414 - 5929894 | 84763.1 |
| Hypothetical protein | SAMN05216248_113100 | Not Available | Negative | 5930035 - 5930637 | 22051.2 |
| Putative tail tube protein | SAMN05216248_113101 | Not Available | Negative | 5930652 - 5930777 | 4596.62 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 1 - 1209 | 18.01 |
| ribonucleoside-diphosphate reductase beta chain | SAMN05216248_1011 | Not Available | Negative | 1 - 263 | 9029.35 |
| protein of unknown function | SAMN05216248_1012 | Not Available | Negative | 748 - 1053 | 11006.2 |
| acetyl-coenzyme a synthetase | SAMN05216248_1013 | Not Available | Positive | 1414 - 3369 | 71609.4 |
| arginine/ornithine transport system substrate-binding protein | SAMN05216248_1014 | Not Available | Positive | 4065 - 4850 | 28390.1 |
| l-arginine abc transporter membrane protein /l-ornithine abc transporter membrane protein | SAMN05216248_1015 | Not Available | Positive | 4942 - 5631 | 24890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
