Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase c-terminal domain-containing protein | SAMN05216248_11388 | Not Available | Positive | 5916804 - 5919386 | 96657.7 |
| restriction endonuclease | SAMN05216248_11389 | Not Available | Positive | 5919528 - 5920466 | 34887.1 |
| Error-prone lesion bypass dna polymerase v | SAMN05216248_11390 | Not Available | Negative | 5920553 - 5921830 | 47337.6 |
| Protein umud | SAMN05216248_11391 | Not Available | Negative | 5921823 - 5922248 | 15272.6 |
| Sos response associated peptidase | SAMN05216248_11392 | Not Available | Positive | 5922350 - 5923099 | 28355.6 |
| Dna adenine methylase gp25 | SAMN05216248_11393 | Not Available | Negative | 5923223 - 5924017 | 30553.5 |
| Lysozyme | SAMN05216248_11394 | Not Available | Negative | 5924167 - 5924709 | 19787.6 |
| Glycoside hydrolase family 19 protein | SAMN05216248_11395 | Not Available | Negative | 5924691 - 5925254 | 20809.7 |
| Putative tail protein | SAMN05216248_11396 | Not Available | Negative | 5925318 - 5926361 | 38223.5 |
| Tail protein x | SAMN05216248_11397 | Not Available | Negative | 5926378 - 5926584 | 7521.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
