Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | SAMN05216248_111149 | Not Available | Negative | 5667807 - 5668850 | 38222.4 |
| Tail protein x | SAMN05216248_111150 | Not Available | Negative | 5668867 - 5669073 | 7507.0 |
| Putative tail protein | SAMN05216248_111151 | Not Available | Negative | 5669048 - 5669893 | 29852.0 |
| Tail length tape measure protein | SAMN05216248_111152 | Not Available | Negative | 5669903 - 5672392 | 85008.6 |
| Hypothetical protein | SAMN05216248_111153 | Not Available | Negative | 5672533 - 5673135 | 22053.2 |
| Putative tail tube protein | SAMN05216248_111154 | Not Available | Negative | 5673150 - 5673275 | 4596.62 |
| Putative integrase | SAMN05216248_11384 | Not Available | Negative | 5915346 - 5915705 | 12788.5 |
| Putative integrase | SAMN05216248_11385 | Not Available | Negative | 5915724 - 5915879 | 5941.96 |
| hypothetical protein | SAMN05216248_11386 | Not Available | Positive | 5916252 - 5916467 | 7610.08 |
| hypothetical protein | SAMN05216248_11387 | Not Available | Positive | 5916512 - 5916679 | 6369.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
