Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna cytosine methyltransferase | SAMN05216248_11127 | Not Available | Positive | 5535795 - 5537540 | 63734.7 |
| Putative transcriptional regulator | SAMN05216248_11128 | Not Available | Positive | 5537537 - 5537803 | 9921.2 |
| tigr02646 family protein | SAMN05216248_11129 | Not Available | Negative | 5537841 - 5538440 | 22893.3 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05216248_11130 | Not Available | Negative | 5538427 - 5539824 | 52148.4 |
| Putative integrase | SAMN05216248_11131 | Not Available | Negative | 5539914 - 5541005 | 42179.8 |
| Attr | Not Available | Not Available | Positive | 5547246 - 5547260 | Not Available |
| Diguanylate cyclase | SAMN05216248_111145 | Not Available | Negative | 5663639 - 5664676 | 37896.8 |
| Dna adenine methylase gp25 | SAMN05216248_111146 | Not Available | Negative | 5665712 - 5666506 | 30609.5 |
| Lysozyme | SAMN05216248_111147 | Not Available | Negative | 5666656 - 5667198 | 19643.6 |
| Glycoside hydrolase family 19 protein | SAMN05216248_111148 | Not Available | Negative | 5667180 - 5667743 | 20803.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
