Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| C2 protein | SAMN05216248_11117 | Not Available | Positive | 5530446 - 5531171 | 26890.1 |
| protein of unknown function | SAMN05216248_11118 | Not Available | Negative | 5531172 - 5532197 | 37746.0 |
| hypothetical protein | SAMN05216248_11119 | Not Available | Positive | 5532389 - 5532565 | 6197.41 |
| hypothetical protein | SAMN05216248_11120 | Not Available | Positive | 5532562 - 5533143 | 21620.0 |
| phage antirepressor protein kilac domain-containing protein | SAMN05216248_11121 | Not Available | Positive | 5533153 - 5533437 | 10832.1 |
| Putative transcriptional regulator | SAMN05216248_11122 | Not Available | Positive | 5533593 - 5533919 | 12334.8 |
| hypothetical protein | SAMN05216248_11123 | Not Available | Positive | 5533969 - 5534367 | 14366.1 |
| hypothetical protein | SAMN05216248_11124 | Not Available | Positive | 5534364 - 5534585 | 8254.99 |
| Hypothetical protein | SAMN05216248_11125 | Not Available | Positive | 5534582 - 5535124 | 20797.0 |
| Hypothetical protein | SAMN05216248_11126 | Not Available | Positive | 5535121 - 5535798 | 24165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
