Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_101685 | Not Available | Positive | 710562 - 710882 | 11893.0 |
| hypothetical protein | SAMN05216248_101686 | Not Available | Positive | 710879 - 711148 | 9561.76 |
| Hypothetical protein | SAMN05216248_101687 | Not Available | Positive | 711145 - 711660 | 19583.4 |
| Putative ning family protein | SAMN05216248_101688 | Not Available | Positive | 711657 - 712292 | 23752.9 |
| Hypothetical protein | SAMN05216248_101689 | Not Available | Positive | 712289 - 712834 | 20094.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216248_101690 | Not Available | Negative | 712972 - 714747 | 66643.5 |
| hypothetical protein | SAMN05216248_101691 | Not Available | Positive | 715135 - 715368 | 8561.32 |
| Hypothetical protein | SAMN05216248_101692 | Not Available | Positive | 715471 - 715710 | 8949.4 |
| Holin | SAMN05216248_101693 | Not Available | Positive | 716037 - 716375 | 12341.2 |
| Hypothetical protein | SAMN05216248_101694 | Not Available | Positive | 716372 - 716716 | 12518.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
