Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | SAMN05216248_10485 | Not Available | Positive | 2957575 - 2959014 | 49481.9 |
| Tail protein | SAMN05216248_10486 | Not Available | Positive | 2959117 - 2959761 | 23692.1 |
| Upf0149 family protein yeca | SAMN05216248_10487 | Not Available | Positive | 2959967 - 2960521 | 20680.0 |
| Putative basteplate assembly protein | SAMN05216248_1111 | Not Available | Negative | 5516579 - 5517154 | 20249.9 |
| Putative minor tail protein | SAMN05216248_1112 | Not Available | Negative | 5517151 - 5517669 | 19122.4 |
| Hypothetical protein | SAMN05216248_1113 | Not Available | Negative | 5517662 - 5518318 | 24191.2 |
| hypothetical protein | SAMN05216248_1114 | Not Available | Negative | 5518315 - 5518635 | 11642.0 |
| Major capsid protein | SAMN05216248_1115 | Not Available | Negative | 5518638 - 5519633 | 36514.7 |
| Head decoration protein d | SAMN05216248_1116 | Not Available | Negative | 5519697 - 5520035 | 11653.9 |
| Head maturation protease | SAMN05216248_1117 | Not Available | Negative | 5520032 - 5521162 | 39700.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
