Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | SAMN05216248_10476 | Not Available | Positive | 2949420 - 2952011 | 90588.2 |
| Tail terminator | SAMN05216248_10477 | Not Available | Positive | 2952011 - 2952892 | 30546.8 |
| Gp20, phage tail protein x | SAMN05216248_10478 | Not Available | Positive | 2952892 - 2953098 | 7718.27 |
| Tail protein | SAMN05216248_10479 | Not Available | Positive | 2953086 - 2954195 | 40344.4 |
| Putative baseplate protein | SAMN05216248_10480 | Not Available | Positive | 2954195 - 2954746 | 19445.9 |
| Gp7 | SAMN05216248_10481 | Not Available | Negative | 2954747 - 2955127 | 14007.1 |
| Attr | Not Available | Not Available | Positive | 2955164 - 2955176 | Not Available |
| Putative baseplate assembly protein with lysozyme | SAMN05216248_10482 | Not Available | Positive | 2955516 - 2955893 | 14016.6 |
| Baseplate protein | SAMN05216248_10483 | Not Available | Positive | 2955877 - 2956998 | 40230.0 |
| Gp25, tail fiber | SAMN05216248_10484 | Not Available | Positive | 2956991 - 2957575 | 21641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
