Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein | SAMN05216248_10466 | Not Available | Positive | 2943878 - 2944801 | 33494.8 |
| hypothetical protein | SAMN05216248_10467 | Not Available | Positive | 2944809 - 2945192 | 12978.7 |
| Gp35 | SAMN05216248_10468 | Not Available | Positive | 2945189 - 2945521 | 10827.1 |
| Gp10, conserved hypothetical protein | SAMN05216248_10469 | Not Available | Positive | 2945530 - 2945961 | 16271.3 |
| Gp37 | SAMN05216248_10470 | Not Available | Positive | 2945961 - 2946449 | 18236.8 |
| Gp38 | SAMN05216248_10471 | Not Available | Positive | 2946446 - 2946658 | 7684.25 |
| Major tail sheath protein | SAMN05216248_10472 | Not Available | Positive | 2946648 - 2948072 | 51185.9 |
| Gp14, phage major tail tube protein | SAMN05216248_10473 | Not Available | Positive | 2948072 - 2948596 | 19405.3 |
| Gp41 | SAMN05216248_10474 | Not Available | Positive | 2948766 - 2949080 | 11045.2 |
| hypothetical protein | SAMN05216248_10475 | Not Available | Negative | 2949140 - 2949400 | 8662.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
