Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN05216248_10456 | Not Available | Positive | 2936127 - 2936741 | 21631.7 |
| Tail tube protein | SAMN05216248_10457 | Not Available | Positive | 2936748 - 2936966 | 8258.24 |
| Pf10805 family protein | SAMN05216248_10458 | Not Available | Positive | 2936963 - 2937268 | 11513.0 |
| Hypothetical protein | SAMN05216248_10459 | Not Available | Positive | 2937265 - 2937558 | 10636.9 |
| Pf11985 family protein | SAMN05216248_10460 | Not Available | Positive | 2937561 - 2938112 | 20409.5 |
| Putative portal protein | SAMN05216248_10461 | Not Available | Positive | 2938109 - 2939713 | 59788.3 |
| Putative portal protein | SAMN05216248_10462 | Not Available | Positive | 2939710 - 2941206 | 55619.0 |
| Virion morphogenesis protein | SAMN05216248_10463 | Not Available | Positive | 2941206 - 2942036 | 30619.6 |
| Capsid and scaffold protein | SAMN05216248_10464 | Not Available | Positive | 2942047 - 2942523 | 17456.6 |
| Gp6 | SAMN05216248_10465 | Not Available | Positive | 2942801 - 2943865 | 38352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
