Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transposase b subunit | SAMN05216248_10447 | Not Available | Negative | 2928232 - 2929413 | 43056.9 |
| Attl | Not Available | Not Available | Positive | 2929017 - 2929029 | Not Available |
| Putative transposase a subunit | SAMN05216248_10448 | Not Available | Negative | 2929413 - 2931188 | 66006.1 |
| Hypothetical protein | SAMN05216248_10449 | Not Available | Negative | 2931192 - 2932121 | 34391.6 |
| Hypothetical protein | SAMN05216248_10450 | Not Available | Negative | 2932132 - 2932434 | 10738.1 |
| Gp13 | SAMN05216248_10451 | Not Available | Negative | 2932543 - 2932911 | 13903.8 |
| Hypothetical protein | SAMN05216248_10452 | Not Available | Negative | 2933302 - 2933514 | 7669.2 |
| hypothetical protein | SAMN05216248_10453 | Not Available | Positive | 2934567 - 2935118 | 19567.2 |
| Putative endolysin | SAMN05216248_10454 | Not Available | Positive | 2935228 - 2935716 | 17792.0 |
| hypothetical protein | SAMN05216248_10455 | Not Available | Positive | 2935713 - 2935931 | 7997.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
