Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head maturation protease | SAMN05216248_102805 | Not Available | Positive | 2095647 - 2096789 | 40223.8 |
| Head decoration protein d | SAMN05216248_102806 | Not Available | Positive | 2096786 - 2097124 | 11638.9 |
| Major capsid | SAMN05216248_102807 | Not Available | Positive | 2097187 - 2098182 | 36297.4 |
| hypothetical protein | SAMN05216248_102808 | Not Available | Positive | 2098185 - 2098505 | 11606.9 |
| Hypothetical protein | SAMN05216248_102809 | Not Available | Positive | 2098502 - 2099158 | 24205.2 |
| Putative minor tail protein | SAMN05216248_102810 | Not Available | Positive | 2099151 - 2099669 | 19222.5 |
| Putative basteplate assembly protein | SAMN05216248_102811 | Not Available | Positive | 2099666 - 2100241 | 20119.7 |
| hypothetical protein | SAMN05216248_102812 | Not Available | Positive | 2100288 - 2100479 | 7012.34 |
| Putative phage tail protein | SAMN05216248_102813 | Not Available | Positive | 2100485 - 2100811 | 12146.7 |
| Attr | Not Available | Not Available | Positive | 2100724 - 2100737 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
