Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adaptor protein clps | SAMN05216248_1011093 | Not Available | Positive | 1128644 - 1128889 | 9329.26 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN05216248_1011094 | Not Available | Positive | 1128919 - 1131189 | 83307.7 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05216248_1011095 | Not Available | Negative | 1131444 - 1131662 | 8303.06 |
| arginine-trna-protein transferase | SAMN05216248_1011096 | Not Available | Negative | 1131763 - 1132470 | 27695.2 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN05216248_1011097 | Not Available | Negative | 1132526 - 1133206 | 25218.9 |
| dna translocase ftsk | SAMN05216248_1011098 | Not Available | Positive | 1133739 - 1136111 | 86802.6 |
| outer membrane lipoprotein carrier protein | SAMN05216248_1011099 | Not Available | Positive | 1136166 - 1136789 | 22540.1 |
| recombination protein mgsa | SAMN05216248_1011100 | Not Available | Positive | 1136800 - 1138122 | 48707.1 |
| crcb protein | SAMN05216248_1011101 | Not Available | Positive | 1138122 - 1138496 | 13168.4 |
| seryl-trna synthetase | SAMN05216248_1011102 | Not Available | Positive | 1138513 - 1139793 | 47117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
