Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMN05216248_1011053 | Not Available | Positive | 1089629 - 1090036 | 14736.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216248_1011054 | Not Available | Positive | 1090055 - 1090816 | 26908.2 |
| hypothetical protein | SAMN05216248_1011055 | Not Available | Positive | 1090843 - 1091115 | 8937.79 |
| hypothetical protein | SAMN05216248_1011056 | Not Available | Positive | 1091175 - 1091999 | 30399.2 |
| putative dna-binding domain-containing protein | SAMN05216248_1011057 | Not Available | Positive | 1091996 - 1092745 | 27538.7 |
| hypothetical protein | SAMN05216248_1011058 | Not Available | Positive | 1092738 - 1093190 | 15648.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05216248_1011059 | Not Available | Positive | 1093277 - 1094641 | 46101.0 |
| predicted arabinose efflux permease, mfs family | SAMN05216248_1011060 | Not Available | Positive | 1094688 - 1095818 | 39477.5 |
| protein of unknown function | SAMN05216248_1011061 | Not Available | Negative | 1095860 - 1096414 | 20478.1 |
| hypothetical protein | SAMN05216248_1011062 | Not Available | Positive | 1096495 - 1096671 | 6666.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
