Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family with cupin sensor | SAMN05216248_1011033 | Not Available | Positive | 1067970 - 1068533 | 20798.6 |
| sulfur acquisition oxidoreductase, sfnb family | SAMN05216248_1011034 | Not Available | Positive | 1068688 - 1069884 | 42892.5 |
| hypothetical protein | SAMN05216248_1011035 | Not Available | Positive | 1069896 - 1070222 | 11754.9 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN05216248_1011036 | Not Available | Positive | 1070222 - 1071601 | 51321.6 |
| amp-binding enzyme | SAMN05216248_1011037 | Not Available | Positive | 1071726 - 1072628 | 34274.2 |
| branched-chain amino acid transport system atp-binding protein | SAMN05216248_1011038 | Not Available | Positive | 1072625 - 1073398 | 27943.0 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05216248_1011039 | Not Available | Positive | 1073395 - 1074276 | 30789.0 |
| branched-chain amino acid transport system permease protein | SAMN05216248_1011040 | Not Available | Positive | 1074281 - 1075330 | 37869.4 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05216248_1011041 | Not Available | Positive | 1075377 - 1076717 | 48815.8 |
| branched-chain amino acid transport system atp-binding protein | SAMN05216248_1011042 | Not Available | Positive | 1076721 - 1077488 | 27471.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
