Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repressor / ci | SAMN05216248_102795 | Not Available | Negative | 2085649 - 2086296 | 23950.7 |
| hypothetical protein | SAMN05216248_102796 | Not Available | Positive | 2086397 - 2086630 | 8398.99 |
| Gp14 | SAMN05216248_102797 | Not Available | Positive | 2086955 - 2087473 | 19018.6 |
| Primase | SAMN05216248_102798 | Not Available | Positive | 2087683 - 2089905 | 82616.4 |
| hypothetical protein | SAMN05216248_102799 | Not Available | Positive | 2089898 - 2090263 | 13556.5 |
| hypothetical protein | SAMN05216248_102800 | Not Available | Negative | 2090613 - 2090987 | 13548.3 |
| hypothetical protein | SAMN05216248_102801 | Not Available | Positive | 2091331 - 2091933 | 22016.3 |
| Large terminase subunit | SAMN05216248_102802 | Not Available | Positive | 2091937 - 2093961 | 75759.0 |
| hypothetical protein | SAMN05216248_102803 | Not Available | Positive | 2093963 - 2094169 | 7696.25 |
| Portal protein | SAMN05216248_102804 | Not Available | Positive | 2094169 - 2095650 | 55137.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
