Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN05216248_101971 | Not Available | Negative | 997787 - 999079 | 46505.4 |
| cell division protein zape | SAMN05216248_101972 | Not Available | Negative | 999119 - 1000213 | 40670.0 |
| spore coat protein u (scpu) domain-containing protein | SAMN05216248_101973 | Not Available | Positive | 1000402 - 1000926 | 18724.7 |
| spore coat protein u (scpu) domain-containing protein | SAMN05216248_101974 | Not Available | Positive | 1000920 - 1001462 | 18441.8 |
| spore coat protein u (scpu) domain-containing protein | SAMN05216248_101975 | Not Available | Positive | 1001481 - 1002023 | 17646.8 |
| spore coat protein u (scpu) domain-containing protein | SAMN05216248_101976 | Not Available | Positive | 1002026 - 1002514 | 16576.7 |
| fimbrial chaperone protein | SAMN05216248_101977 | Not Available | Positive | 1002540 - 1003328 | 28699.2 |
| outer membrane usher protein | SAMN05216248_101978 | Not Available | Positive | 1003444 - 1005762 | 84263.5 |
| spore coat protein u (scpu) domain-containing protein | SAMN05216248_101979 | Not Available | Positive | 1005759 - 1006733 | 33373.6 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN05216248_101980 | Not Available | Negative | 1006730 - 1007467 | 26896.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
