Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase | SAMN05216248_101961 | Not Available | Negative | 986481 - 987611 | 41259.2 |
| 2,4-dienoyl-coa reductase | SAMN05216248_101962 | Not Available | Positive | 987824 - 989863 | 73109.1 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN05216248_101963 | Not Available | Positive | 989921 - 990805 | 31430.8 |
| cytochrome b561 | SAMN05216248_101964 | Not Available | Negative | 990795 - 991352 | 20766.2 |
| phosphonoacetaldehyde hydrolase | SAMN05216248_101965 | Not Available | Negative | 991467 - 992297 | 30125.2 |
| 2-aminoethylphosphonate-pyruvate transaminase | SAMN05216248_101966 | Not Available | Negative | 992323 - 993432 | 39966.3 |
| aminoethylphosphonate catabolism associated lysr family transcriptional regulator | SAMN05216248_101967 | Not Available | Positive | 993546 - 994406 | 31215.2 |
| aminoethylphosphonate catabolism associated lysr family transcriptional regulator | SAMN05216248_101968 | Not Available | Negative | 994376 - 995272 | 33031.8 |
| sugar phosphate permease | SAMN05216248_101969 | Not Available | Positive | 995528 - 996853 | 46677.1 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05216248_101970 | Not Available | Positive | 996963 - 997670 | 25251.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
