Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase (penicillin-binding protein 7) | SAMN05216248_101941 | Not Available | Negative | 965453 - 966376 | 33651.8 |
| methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN05216248_101942 | Not Available | Negative | 966584 - 967438 | 30423.0 |
| Trna-arg | Not Available | Not Available | Positive | 967718 - 967791 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 967827 - 967899 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 967959 - 968040 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 968121 - 968193 | Not Available |
| trigger factor | SAMN05216248_101947 | Not Available | Positive | 968598 - 969908 | 48377.4 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05216248_101948 | Not Available | Positive | 970000 - 970635 | 23366.2 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05216248_101949 | Not Available | Positive | 970748 - 972031 | 46926.2 |
| atp-dependent proteinase. serine peptidase. merops family s16 | SAMN05216248_101950 | Not Available | Positive | 972206 - 974602 | 88790.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
