Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase (nadph/nadh) small chain | SAMN05216248_101931 | Not Available | Negative | 950373 - 951740 | 49392.1 |
| dihydropyrimidinase | SAMN05216248_101932 | Not Available | Negative | 951902 - 953341 | 52576.3 |
| nucleobase:cation symporter-1, ncs1 family | SAMN05216248_101933 | Not Available | Positive | 953933 - 955420 | 53480.2 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN05216248_101934 | Not Available | Positive | 955579 - 956862 | 44974.1 |
| hypothetical protein | SAMN05216248_101935 | Not Available | Negative | 956993 - 957202 | 7367.68 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05216248_101936 | Not Available | Negative | 957799 - 959217 | 51140.9 |
| rnd family efflux transporter, mfp subunit | SAMN05216248_101937 | Not Available | Negative | 959201 - 960370 | 41695.2 |
| multidrug efflux pump subunit acrb | SAMN05216248_101938 | Not Available | Negative | 960360 - 963581 | 114163.0 |
| hypothetical protein | SAMN05216248_101939 | Not Available | Positive | 963780 - 964190 | 14805.5 |
| hypothetical protein | SAMN05216248_101940 | Not Available | Positive | 964832 - 965296 | 16796.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
