Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05216248_101921 | Not Available | Negative | 941467 - 941994 | 19333.4 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05216248_101922 | Not Available | Negative | 942059 - 943021 | 34931.1 |
| sugar lactone lactonase yvre | SAMN05216248_101923 | Not Available | Negative | 943073 - 943948 | 31558.2 |
| uronate dehydrogenase | SAMN05216248_101924 | Not Available | Negative | 943952 - 944776 | 30332.7 |
| outer membrane porin, oprd family | SAMN05216248_101925 | Not Available | Negative | 945009 - 946271 | 46092.9 |
| putative copper resistance protein d | SAMN05216248_101926 | Not Available | Negative | 946529 - 947386 | 30861.9 |
| hypothetical protein | SAMN05216248_101927 | Not Available | Negative | 947390 - 947755 | 12470.9 |
| putative acetyltransferase | SAMN05216248_101928 | Not Available | Negative | 947749 - 948216 | 17424.8 |
| transcriptional regulator, tetr family | SAMN05216248_101929 | Not Available | Positive | 948360 - 948980 | 23720.5 |
| dihydroorotate oxidase b, catalytic subunit /dihydrouracil dehydrogenase (nad+) /dihydropyrimidine dehydrogenase (nadp+) | SAMN05216248_101930 | Not Available | Negative | 949099 - 950373 | 46064.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
