Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | SAMN05216248_101911 | Not Available | Positive | 928584 - 930104 | 55170.1 |
| alcohol dehydrogenase, class iv | SAMN05216248_101912 | Not Available | Positive | 930499 - 931662 | 41321.2 |
| signal transduction histidine kinase | SAMN05216248_101913 | Not Available | Positive | 931646 - 933016 | 50697.2 |
| anion transporter | SAMN05216248_101914 | Not Available | Positive | 933096 - 934574 | 51349.7 |
| hypothetical protein | SAMN05216248_101915 | Not Available | Negative | 934759 - 935547 | 27676.2 |
| transcriptional regulator, tetr family | SAMN05216248_101916 | Not Available | Positive | 935725 - 936312 | 20754.4 |
| major facilitator superfamily protein | SAMN05216248_101917 | Not Available | Positive | 936429 - 938072 | 59429.4 |
| multidrug resistance efflux pump | SAMN05216248_101918 | Not Available | Positive | 938069 - 939214 | 40754.7 |
| aldose 1-epimerase | SAMN05216248_101919 | Not Available | Negative | 939325 - 940185 | 31540.5 |
| trap transporter, dctm subunit | SAMN05216248_101920 | Not Available | Negative | 940185 - 941465 | 45217.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
