Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216248_102785 | Not Available | Positive | 2079744 - 2080514 | 28649.3 |
| Integrase | SAMN05216248_102786 | Not Available | Negative | 2080571 - 2081785 | 45494.2 |
| putative excisionase | SAMN05216248_102787 | Not Available | Negative | 2081782 - 2081997 | 8411.1 |
| hypothetical protein | SAMN05216248_102788 | Not Available | Negative | 2082164 - 2082385 | 8302.31 |
| hypothetical protein | SAMN05216248_102789 | Not Available | Negative | 2082382 - 2082801 | 15378.3 |
| pyocin activator protein prtn | SAMN05216248_102790 | Not Available | Negative | 2083052 - 2083375 | 12069.5 |
| phage antirepressor protein kilac domain-containing protein | SAMN05216248_102791 | Not Available | Negative | 2083516 - 2083800 | 10851.1 |
| hypothetical protein | SAMN05216248_102792 | Not Available | Negative | 2083810 - 2084391 | 21596.9 |
| hypothetical protein | SAMN05216248_102793 | Not Available | Negative | 2084388 - 2084564 | 6250.42 |
| Hypothetical protein | SAMN05216248_102794 | Not Available | Negative | 2084658 - 2085617 | 35806.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
