Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate binding protein, pqq-dependent alcohol dehydrogenase system | SAMN05216248_101901 | Not Available | Negative | 917355 - 918527 | 42831.1 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN05216248_101902 | Not Available | Positive | 918687 - 919976 | 47515.4 |
| two component transcriptional regulator, luxr family | SAMN05216248_101903 | Not Available | Positive | 919973 - 920599 | 22855.0 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05216248_101904 | Not Available | Negative | 920638 - 921285 | 23273.4 |
| alcohol dehydrogenase (cytochrome c) | SAMN05216248_101905 | Not Available | Negative | 921364 - 923256 | 69118.0 |
| cytochrome c-550 pedf | SAMN05216248_101906 | Not Available | Positive | 923512 - 923973 | 16427.3 |
| abc-type amino acid transport substrate-binding protein | SAMN05216248_101907 | Not Available | Positive | 923977 - 924852 | 32753.8 |
| sulfur-oxidizing protein soxy | SAMN05216248_101908 | Not Available | Positive | 924862 - 925611 | 27379.9 |
| quinoprotein relay system zinc metallohydrolase 1 | SAMN05216248_101909 | Not Available | Positive | 925628 - 926560 | 34152.2 |
| alcohol dehydrogenase (cytochrome c) | SAMN05216248_101910 | Not Available | Positive | 926687 - 928462 | 64526.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
