Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arsr family | SAMN05216248_101891 | Not Available | Positive | 907759 - 908094 | 12067.7 |
| sulfide:quinone oxidoreductase | SAMN05216248_101892 | Not Available | Positive | 908145 - 909389 | 45781.6 |
| hypothetical protein | SAMN05216248_101893 | Not Available | Positive | 909390 - 910196 | 27094.6 |
| uncharacterized conserved protein, contains fist_n domain | SAMN05216248_101894 | Not Available | Positive | 910328 - 911473 | 41509.4 |
| pas domain s-box-containing protein | SAMN05216248_101895 | Not Available | Positive | 911415 - 913355 | 72360.0 |
| two component transcriptional regulator, luxr family | SAMN05216248_101896 | Not Available | Negative | 913502 - 914167 | 24521.8 |
| pqq-dependent catabolism-associated cxxcw motif protein | SAMN05216248_101897 | Not Available | Negative | 914183 - 914731 | 20534.3 |
| abc-2 type transport system permease protein | SAMN05216248_101898 | Not Available | Negative | 914840 - 915631 | 29536.5 |
| abc-2 type transport system atp-binding protein | SAMN05216248_101899 | Not Available | Negative | 915628 - 916368 | 26807.3 |
| pqq-dependent catabolism-associated beta-propeller protein | SAMN05216248_101900 | Not Available | Negative | 916365 - 917324 | 34786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
